PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5DD1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	61.5	H1	13	H1-13-1	16	AVSGVSFSSFWWG	BBBLBBAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	40.0	H2	10	H2-10-1	19	TIYGSSGRGE	BBBAAALBEB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	50.0	H3	21	H3-21-*	-1	SRGlfqpngfSFTLTSYWFDV
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	62.5	H4	8	H4-8-*	-1	RdtsksQI
L	kappa	Macaca.mulatta	Ma_IGKV1S6*01	91.3	Ma_IGKV1S6*01	72.7	L1	11	L1-11-1	6	RTSQSISTWLA	BBABBAEABBB
L	kappa	Macaca.mulatta	Ma_IGKV1S6*01	91.3	Ma_IGKV1S6*01	87.5	L2	8	L2-8-1	6	YTASSLAS	BLLABBBB
L	kappa	Macaca.mulatta	Ma_IGKV1S6*01	91.3	Ma_IGKV1S6*01	57.1	L3	9	L3-9-cis7-1	9	QQYISLPPT	BBAABBbBB
L	kappa	Macaca.mulatta	Ma_IGKV1S6*01	91.3	Ma_IGKV1S6*01	83.3	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022