PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5D96

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	9	KASQDVSGAVA	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	8	SMASQRYT	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	71.4	L3	9	L3-9-cis7-1	8	QQHYAIPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV2-6-7*01	93.2	Mo_IGHV2-6-7*01	84.6	H1	13	H1-13-1	15	TVSGFSLTGYSVI	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV2-6-7*01	93.2	Mo_IGHV2-6-7*01	77.8	H2	9	H2-9-1	6	MIWGDGRTE	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV2-6-7*01	93.2	Mo_IGHV2-6-7*01	50.0	H3	12	H3-12-*	-1	ASDSMDPGSFAY	BBBBABBLBBAB
C	heavy	Mus.musculus	Mo_IGHV2-6-7*01	93.2	Mo_IGHV2-6-7*01	100.0	H4	8	H4-8-1	9	KDNSKSQV	BBAAALBB
I	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	9	KASQDVSGAVA	BBABBAEABBB
I	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	8	SMASQRYT	BLLABBBB
I	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	71.4	L3	9	L3-9-cis7-1	8	QQHYAIPLT	BBAABBbBB
I	kappa	Mus.musculus	Mo_IGKV6-17*01	95.7	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
J	heavy	Mus.musculus	Mo_IGHV2-6-7*01	93.2	Mo_IGHV2-6-7*01	84.6	H1	13	H1-13-1	15	TVSGFSLTGYSVI	BBBLBBAAABBBB
J	heavy	Mus.musculus	Mo_IGHV2-6-7*01	93.2	Mo_IGHV2-6-7*01	77.8	H2	9	H2-9-1	6	MIWGDGRTE	BBBAALBBB
J	heavy	Mus.musculus	Mo_IGHV2-6-7*01	93.2	Mo_IGHV2-6-7*01	50.0	H3	12	H3-12-*	-1	ASDSMDPGSFAY	BBBBABBLBBAB
J	heavy	Mus.musculus	Mo_IGHV2-6-7*01	93.2	Mo_IGHV2-6-7*01	100.0	H4	8	H4-8-1	10	KDNSKSQV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022