PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5D8J

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-55*01	97.3	Mo_IGHV1-55*01	92.3	H1	13	H1-13-1	9	KASGYTFTSNWIT	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-55*01	97.3	Mo_IGHV1-55*01	90.0	H2	10	H2-10-3	12	DIYPGSGSTT	BBBBLALBBB
H	heavy	Mus.musculus	Mo_IGHV1-55*01	97.3	Mo_IGHV1-55*01	100.0	H3	12	H3-12-*	-1	ARLRGYYDYFDF	BBBBBEELBBAB
H	heavy	Mus.musculus	Mo_IGHV1-55*01	97.3	Mo_IGHV1-55*01	100.0	H4	8	H4-8-1	10	VDTSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-53*01	98.6	Mo_IGKV4-53*01	100.0	L1	12	L1-12-1	9	SVSSSISsSNLH	BBABBBBAAABB
L	kappa	Mus.musculus	Mo_IGKV4-53*01	98.6	Mo_IGKV4-53*01	100.0	L2	8	L2-8-*	-1	YGTSNLAS	BLLAAEBB
L	kappa	Mus.musculus	Mo_IGKV4-53*01	98.6	Mo_IGKV4-53*01	87.5	L3	9	L3-9-cis7-1	10	QQWSHYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-53*01	98.6	Mo_IGKV4-53*01	100.0	L4	6	L4-6-2	24	GSGTSY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022