PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5D7S

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	97.3	Hu_IGHV3-66*01	69.2	H1	13	H1-13-1	11	AASGFTFSSYWMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	97.3	CDRLenMismatch	-1.0	H2	12	H2-12-1	8	GIENKyaGGATY	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	97.3	Hu_IGHV3-66*01	100.0	H3	8	H3-8-2	6	ARGFGTDF	BBEAALAB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	97.3	Hu_IGHV3-66*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	63.6	L1	11	L1-11-3	12	SGDSIGKKYAY	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	CDRLenMismatch	-1.0	L2	6	L2-6-*	-1	YKKRPS
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	25.0	L3	9	L3-9-*	-1	SAWGDKGMV	BBBBAAEBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	12	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022