PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5CP3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	5	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100.0	L2	8	L2-8-*	-1	YLVSKLDS	BLLABBBA
A	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	11	WQGTHFPQT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV1-135*01	94.2	Mo_IGKV1-135*01	83.3	L4	6	L4-6-1	6	GAGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.1	Mo_IGHV3-1*02	100.0	H1	14	H1-14-1	9	TVTGYSITSgYSWH	BBBLBBAAAEEBBB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.1	Mo_IGHV3-1*02	100.0	H2	9	H2-9-1	10	YIHYSGSTN	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.1	Mo_IGHV3-1*02	100.0	H3	6	H3-6-*	-1	ARYGGY	BBBLLB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.1	Mo_IGHV3-1*02	100.0	H4	8	H4-8-1	8	RDTSKNQF	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022