PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5CHN

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	83.6	Hu_IGHV1-46*01	92.3	H1	13	H1-13-1	7	KASGYTFTSYFMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	83.6	Hu_IGHV1-46*01	60.0	H2	10	H2-10-*	-1	ITYPGGGSPS	BBBAAEbLBB
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	83.6	Hu_IGHV1-46*01	100.0	H3	15	H3-15-*	-1	ARGAHRSiGTTPLDS
A	heavy	Homo.sapiens	Hu_IGHV1-46*01	83.6	Hu_IGHV1-46*01	62.5	H4	8	H4-8-1	7	DDTSATTV	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.5	Hu_IGKV2D-29*02	100.0	L1	16	L1-16-*	-1	KSSQSLlhsdgKTYLY	BBABBABBBAbBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.5	Hu_IGKV2D-29*02	87.5	L2	8	L2-8-1	7	YEVSNRLS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.5	Hu_IGKV2D-29*02	85.7	L3	10	L3-10-cis78-*	-1	MQSIQVPlYT	BBAABBbABB
B	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.5	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	83.6	Hu_IGHV1-46*01	92.3	H1	13	H1-13-1	7	KASGYTFTSYFMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	83.6	Hu_IGHV1-46*01	60.0	H2	10	H2-10-*	-1	ITYPGGGSPS	BBBBLLBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	83.6	Hu_IGHV1-46*01	100.0	H3	15	H3-15-*	-1	ARGAHRSiGTTPLDS
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	83.6	Hu_IGHV1-46*01	62.5	H4	8	H4-8-1	6	DDTSATTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.5	Hu_IGKV2D-29*02	100.0	L1	16	L1-16-1	23	KSSQSLlhsdgKTYLY	BBABBABBBALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.5	Hu_IGKV2D-29*02	87.5	L2	8	L2-8-1	5	YEVSNRLS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.5	Hu_IGKV2D-29*02	85.7	L3	10	L3-10-cis78-*	-1	MQSIQVPlYT	BBAABBaABB
L	kappa	Homo.sapiens	Hu_IGKV2D-29*02	98.5	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-3	32	GSGTDF	EAAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022