PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5CEY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-21*01	72.6	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	ABBBABBBBBB
A	lambda	Homo.sapiens	Hu_IGLV3-21*01	72.6	Hu_IGLV3-21*01	62.5	L2	8	L2-8-1	14	YNNQDRPS	BLEABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-21*01	72.6	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
A	lambda	Homo.sapiens	Hu_IGLV3-21*01	72.6	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTRA
B	heavy	Homo.sapiens	Hu_IGHV4-59*03	90.4	Hu_IGHV4-59*03	76.9	H1	13	H1-13-1	13	IVSGGSISNYYWT	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*03	90.4	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	11	YISDRETTT	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*03	90.4	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYYMDV
B	heavy	Homo.sapiens	Hu_IGHV4-59*03	90.4	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	9	RDTSKNQL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	72.6	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	ABBBABBBBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	72.6	Hu_IGLV3-21*01	62.5	L2	8	L2-8-1	12	YNNQDRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	72.6	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	72.6	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfgtRA
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	90.4	Hu_IGHV4-59*03	76.9	H1	13	H1-13-1	11	IVSGGSISNYYWT	BBBLEBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	90.4	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	12	YISDRETTT	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	90.4	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYYMDV
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	90.4	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	9	RDTSKNQL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022