PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5CBE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGgtFSSYAIS
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	19	GIIPIFGTAN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H3	20	H3-20-*	-1	AREPDYYDSsgyypiDAFDI
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	9	ADESTSTA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	78.6	L1	14	L1-14-2	14	TGTSSDVGAyDWVS	BBBAAAAAABAABB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	62.5	L2	8	L2-8-4	11	FDVNNRPS	BEAABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	33.3	L3	10	L3-10-1	14	ASATLLDTYV	BBBBAALBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BAEEBBBBLBBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	12	GIIPIFGTAN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H3	20	H3-20-*	-1	AREPDYYDSsgyypiDAFDI
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	17	ADESTSTA	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	78.6	L1	14	L1-14-2	19	TGTSSDVGAyDWVS	BBBAAAAAABAABB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	62.5	L2	8	L2-8-4	10	FDVNNRPS	BEAABBBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	33.3	L3	10	L3-10-1	14	ASATLLDTYV	BBBBAALBBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022