PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5C6W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBLBABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	10	GIIPIFGTAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H3	20	H3-20-*	-1	AREPDYYDSsgyypiDAFDI
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	6	ADESTSTA	BBAAALBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	78.6	L1	14	L1-14-2	11	TGTSSDVGAyDWVS	BBBAAAAAABBABB
H	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	7	FDVNNRPS	BLEABBBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	33.3	L3	10	L3-10-1	15	ASATLLDTYV	BBBBAALBBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	11	KSGNTA	BBEABB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBLBAABBBBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H2	10	H2-10-1	14	GIIPIFGTAN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H3	20	H3-20-*	-1	AREPDYYDSsgyypiDAFDI
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	100.0	Hu_IGHV1-69*01	100.0	H4	8	H4-8-1	8	ADESTSTA	BBAAALBB
J	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	78.6	L1	14	L1-14-2	10	TGTSSDVGAyDWVS	BBBAAAAAABBABB
J	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	62.5	L2	8	L2-8-1	8	FDVNNRPS	BLEABBBB
J	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	33.3	L3	10	L3-10-1	14	ASATLLDTYV	BBBBAALBBB
J	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022