PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5C6T

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	73.3	H1	15	H1-15-*	-1	TVSGASIdrSTYYWG	BBAAbBAEAAAEBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	44.4	H2	9	H2-9-*	-1	NIYYNGRAV	BBBABABBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	50.0	H3	12	H3-12-*	-1	ATRWNYFFDFDY	BBBABBEEABBE
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	12	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	76.9	L1	13	L1-13-1	21	SGSSSNIETNYVS	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	100.0	L2	8	L2-8-*	-1	YRNNQRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	33.3	L3	9	L3-9-*	-1	GTWDDNSWV	EBBBAABBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	100.0	L4	6	L4-6-2	21	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022