PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5C0R

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	69.2	H1	13	H1-13-*	-1	GTSGFTLTDDYMT	BBBEBBABBABBB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	83.3	H2	12	H2-12-1	17	FIRDraNGYTTE	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	66.7	H3	13	H3-13-*	-1	ARPKGYFPYAMDY	BBBABBEBABBAB
H	heavy	Mus.musculus	Mo_IGHV7-3*02	97.3	Mo_IGHV7-3*02	87.5	H4	8	H4-8-*	-1	RDNSQSIV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-98*01	100.0	Mo_IGKV12-98*01	100.0	L1	11	L1-11-1	19	LASQTIGTWLA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV12-98*01	100.0	Mo_IGKV12-98*01	100.0	L2	8	L2-8-1	8	YAATSLAD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-98*01	100.0	Mo_IGKV12-98*01	100.0	L3	9	L3-9-cis7-1	15	QQLYSTPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV12-98*01	100.0	Mo_IGKV12-98*01	100.0	L4	6	L4-6-1	13	GSGTKF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022