PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5BV7

#CDRs = 8; #Clusters = 14.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	97.0	Hu_IGLV3-1*01	63.6	L1	11	L1-11-3	11	SGDKLGNKFTS	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	97.0	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	14	YQDTKRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	97.0	Hu_IGLV3-1*01	100.0	L3	10	L3-10-*	-1	QAWDSSTAWV	BBBBAABBLB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	97.0	Hu_IGLV3-1*01	83.3	L4	6	L4-6-2	20	TSGNTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	18	AASGFTFSSYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	90.0	H2	10	H2-10-2	28	VIWYDGSNKF	BBBAALBBBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	19	H3-19-*	-1	AREGAavrsfYYSYYGMDV
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	100.0	Hu_IGHV4-31*02	86.7	H1	15	H1-15-*	-1	TVSGASISSggYNWS	BBBLBBAAAELBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	100.0	Hu_IGHV4-31*02	100.0	H2	9	H2-9-1	9	YIYYSGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	100.0	Hu_IGHV4-31*02	100.0	H3	18	H3-18-*	-1	ARERGYCSstscSRVMDV
H	heavy	Homo.sapiens	Hu_IGHV4-31*02	100.0	Hu_IGHV4-31*02	100.0	H4	8	H4-8-1	9	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	100.0	L1	11	L1-11-4	14	QGDSLRSYYAS	BEAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEBLBBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	77.8	L3	11	L3-11-*	-1	NSRDNIGNHQV	BBBBAABABBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	100.0	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	17	SSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022