PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5BO1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	76.9	H1	13	H1-13-*	-1	AASGFTFSNYGIH	BBBLBBBLAAEBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	40.0	H2	10	H2-10-6	13	WITPDGGYTD	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	100.0	H3	9	H3-9-*	-1	ARAGTLFAY	BBBLALLAB
H	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	50.0	H4	8	H4-8-1	12	ADTSKNTA	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	76.9	H1	13	H1-13-*	-1	AASGFTFSNYGIH	BBBLBBAAABEBB
I	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	40.0	H2	10	H2-10-6	10	WITPDGGYTD	BBBABLLBBB
I	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	100.0	H3	9	H3-9-*	-1	ARAGTLFAY	BBBLALLAB
I	heavy	Homo.sapiens	Hu_IGHV3-74*03	91.8	Hu_IGHV3-74*03	50.0	H4	8	H4-8-1	10	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	63.6	L1	11	L1-11-1	5	RASQDVSTAVA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	62.5	L2	8	L2-8-1	12	YSASFLYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-2	10	QQYYTTATT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
M	kappa	Homo.sapiens	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	63.6	L1	11	L1-11-1	5	RASQDVSTAVA	BBABBAEABBB
M	kappa	Homo.sapiens	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	62.5	L2	8	L2-8-1	7	YSASFLYS	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-2	9	QQYYTTATT	BBAABABBB
M	kappa	Homo.sapiens	Hu_IGKV1D-13*01	98.5	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022