PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5A16

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	80.0	H1	15	H1-15-1	12	SFSGFSLTTSgiGVG	BBBLBBAABBLBBBB
A	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	66.7	H2	9	H2-9-1	14	HIWWSASKY	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	66.7	H3	15	H3-15-*	-1	ARAYYGNYgGYYFDY
A	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	87.5	H4	8	H4-8-1	10	KDTSNNQV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQSVStssySYMN	BBABBABBAABBBBB
B	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L2	8	L2-8-1	6	KYASNLES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	9	QHSWEIPWT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	80.0	H1	15	H1-15-1	12	SFSGFSLTTSgiGVG	BBBLBBAABBLBBBB
C	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	66.7	H2	9	H2-9-1	15	HIWWSASKY	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	66.7	H3	15	H3-15-*	-1	ARAYYGNYgGYYFDY
C	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	87.5	H4	8	H4-8-1	9	KDTSNNQV	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQSVStssySYMN	BBABBABBAABBBBB
D	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L2	8	L2-8-1	6	KYASNLES	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	9	QHSWEIPWT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	80.0	H1	15	H1-15-1	12	SFSGFSLTTSgiGVG	BBBLBBAABBLBBBB
E	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	66.7	H2	9	H2-9-1	15	HIWWSASKY	BBBAALBBB
E	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	66.7	H3	15	H3-15-*	-1	ARAYYGNYgGYYFDY
E	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	87.5	H4	8	H4-8-1	9	KDTSNNQV	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQSVStssySYMN	BBABBABBAABBBBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L2	8	L2-8-1	6	KYASNLES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	9	QHSWEIPWT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
G	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	80.0	H1	15	H1-15-1	12	SFSGFSLTTSgiGVG	BBBLBBAABBLBBBB
G	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	66.7	H2	9	H2-9-1	14	HIWWSASKY	BBBAALBBB
G	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	66.7	H3	15	H3-15-*	-1	ARAYYGNYgGYYFDY
G	heavy	Mus.musculus	Mo_IGHV8-8*01	90.4	Mo_IGHV8-8*01	87.5	H4	8	H4-8-1	9	KDTSNNQV	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQSVStssySYMN	BBABBABBAABBBBB
H	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L2	8	L2-8-1	6	KYASNLES	BLLABBBB
H	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L3	9	L3-9-cis7-1	9	QHSWEIPWT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022