PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4ZTP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	91.4	Rb_IGHV1S40*01	71.4	H1	14	H1-14-*	-1	KASGIDFSSfYYMC	BBBLBBAABBBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	91.4	Rb_IGHV1S40*01	36.4	H2	11	H2-11-*	-1	CIVTDiTGESY	BBBABAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	91.4	Rb_IGHV1S40*01	100.0	H3	17	H3-17-*	-1	ARGDTYGYgdtVYALNL
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	91.4	Rb_IGHV1S40*01	100.0	H4	7	H4-7-1	7	KTSSTTV	BABAABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S49*01	91.0	Rb_IGKV1S49*01	45.5	L1	11	L1-11-1	6	QASQAIDEYLG	BBABBAEABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S49*01	91.0	Rb_IGKV1S49*01	87.5	L2	8	L2-8-1	5	YYASTLAS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S49*01	91.0	Rb_IGKV1S49*01	36.4	L3	14	L3-14-*	-1	QNYYvgsstNYAFT
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S49*01	91.0	Rb_IGKV1S49*01	66.7	L4	6	L4-6-1	3	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022