PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4ZSO

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Mo_IGKV4-68*01	98.6	Mo_IGKV4-68*01	100.0	L1	10	L1-10-1	8	SASSSVSYMY	BBABBBABBB
A	kappa	Homo.sapiens	Mo_IGKV4-68*01	98.6	Mo_IGKV4-68*01	100.0	L2	8	L2-8-1	4	YLTSNLAS	BLLABBBB
A	kappa	Homo.sapiens	Mo_IGKV4-68*01	98.6	Mo_IGKV4-68*01	87.5	L3	9	L3-9-cis7-1	16	QQWSSNPLT	BBBABBbBB
A	kappa	Homo.sapiens	Mo_IGKV4-68*01	98.6	Mo_IGKV4-68*01	100.0	L4	6	L4-6-1	9	GSGTSY	EBEABB
B	heavy	Homo.sapiens	Mo_IGHV1S121*01	100.0	Mo_IGHV1S121*01	100.0	H1	13	H1-13-1	9	KASGYTFTSYNMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Mo_IGHV1S121*01	100.0	Mo_IGHV1S121*01	100.0	H2	10	H2-10-3	23	AIYPGNGDTS	BBBBLALBBB
B	heavy	Homo.sapiens	Mo_IGHV1S121*01	100.0	Mo_IGHV1S121*01	0.0	H3	14	H3-14-*	-1	AREGLGALLRDLYY	BBBBBEAABLBBAB
B	heavy	Homo.sapiens	Mo_IGHV1S121*01	100.0	Mo_IGHV1S121*01	100.0	H4	8	H4-8-1	8	ADKSSSTA	BBAAALBB
C	kappa	Homo.sapiens	Mo_IGKV4-68*01	98.6	Mo_IGKV4-68*01	100.0	L1	10	L1-10-1	9	SASSSVSYMY	BBABBBABBB
C	kappa	Homo.sapiens	Mo_IGKV4-68*01	98.6	Mo_IGKV4-68*01	100.0	L2	8	L2-8-1	4	YLTSNLAS	BLLABBBB
C	kappa	Homo.sapiens	Mo_IGKV4-68*01	98.6	Mo_IGKV4-68*01	87.5	L3	9	L3-9-cis7-1	14	QQWSSNPLT	BBBABBbBB
C	kappa	Homo.sapiens	Mo_IGKV4-68*01	98.6	Mo_IGKV4-68*01	100.0	L4	6	L4-6-1	6	GSGTSY	EBEABB
D	heavy	Homo.sapiens	Mo_IGHV1S121*01	100.0	Mo_IGHV1S121*01	100.0	H1	13	H1-13-1	8	KASGYTFTSYNMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Mo_IGHV1S121*01	100.0	Mo_IGHV1S121*01	100.0	H2	10	H2-10-1	11	AIYPGNGDTS	BBBAAALBBB
D	heavy	Homo.sapiens	Mo_IGHV1S121*01	100.0	Mo_IGHV1S121*01	0.0	H3	14	H3-14-*	-1	AREGLGALLRDLYY	BBBBBEAABLBBAB
D	heavy	Homo.sapiens	Mo_IGHV1S121*01	100.0	Mo_IGHV1S121*01	100.0	H4	8	H4-8-1	9	ADKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022