PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4ZS6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-11*03	91.8	Hu_IGHV3-11*03	76.9	H1	13	H1-13-*	-1	AASGFSLSDYYMN	BBBLBBBLABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-11*03	91.8	Hu_IGHV3-11*03	90.0	H2	10	H2-10-*	-1	YISSSSGYTN	BBBBBLLBBB
C	heavy	Homo.sapiens	Hu_IGHV3-11*03	91.8	Hu_IGHV3-11*03	50.0	H3	14	H3-14-*	-1	VRDRDDFWSGYYKH	BBBABABBALBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-11*03	91.8	Hu_IGHV3-11*03	87.5	H4	8	H4-8-*	-1	RDHAKNSL	BBABLLBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.6	Hu_IGKV1-33*01	54.5	L1	11	L1-11-2	10	RASQDINSFLA	BBABBALLBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.6	Hu_IGKV1-33*01	87.5	L2	8	L2-8-4	13	YGASNLET	BEAABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.6	Hu_IGKV1-33*01	85.7	L3	8	L3-8-3	14	QQYDKLPT	BBAABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.6	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-11*03	91.8	Hu_IGHV3-11*03	76.9	H1	13	H1-13-*	-1	AASGFSLSDYYMN	BBBLBBBLABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*03	91.8	Hu_IGHV3-11*03	90.0	H2	10	H2-10-*	-1	YISSSSGYTN	BBBBBLLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*03	91.8	Hu_IGHV3-11*03	50.0	H3	14	H3-14-*	-1	VRDRDDFWSGYYKH	BBBABABBALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-11*03	91.8	Hu_IGHV3-11*03	87.5	H4	8	H4-8-*	-1	RDHAKNSL	BBABLLBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.6	Hu_IGKV1-33*01	54.5	L1	11	L1-11-2	10	RASQDINSFLA	BBABBALLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.6	Hu_IGKV1-33*01	87.5	L2	8	L2-8-4	14	YGASNLET	BEAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.6	Hu_IGKV1-33*01	85.7	L3	8	L3-8-3	14	QQYDKLPT	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.6	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022