PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4ZFG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ra_IGHV5-19*01	69.2	H1	13	H1-13-1	14	AASGFTISDYWIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Ra_IGHV5-19*01	60.0	H2	10	H2-10-6	16	GITPAGGYTY	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	13	H3-13-*	-1	ARFVFFLPYAMDY	BBBBABBaLBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	7	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Ra_IGKV4S3*01	41.7	L1	12	L1-12-1	9	RASQFLSSFgVA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Ra_IGKV4S3*01	50.0	L2	8	L2-8-1	5	YGASSLYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	28.6	L3	9	L3-9-cis7-1	24	QQGLLSPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022