PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4Z5R

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	100.0	L1	15	L1-15-*	-1	RASQSVStssySYMH	BBABBABBAABBBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	7	SYASNLES	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-2	10	QHSWGIPRT	BBABEBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	76.9	H1	13	H1-13-1	10	ATSGYTFTEYIIH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	40.0	H2	10	H2-10-*	-1	SINPDYDITN	BBBAABABBB
B	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H3	10	H3-10-*	-1	ASWISDFFDY	BBBABEBBAB
B	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	LDKSKRTA	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	100.0	L1	15	L1-15-*	-1	RASQSVStssySYMH	BBABBABBAABBBBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	7	SYASNLES	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-2	11	QHSWGIPRT	BBABEBbBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	76.9	H1	13	H1-13-1	9	ATSGYTFTEYIIH	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	40.0	H2	10	H2-10-*	-1	SINPDYDITN	BBBAABABBB
K	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H3	10	H3-10-*	-1	ASWISDFFDY	BBBABEBBAB
K	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	LDKSKRTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	100.0	L1	15	L1-15-*	-1	RASQSVStssySYMH	BBABBABBAABBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	8	SYASNLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-2	11	QHSWGIPRT	BBABEBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	76.9	H1	13	H1-13-1	9	ATSGYTFTEYIIH	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	40.0	H2	10	H2-10-*	-1	SINPDYDITN	BBBAABABBB
M	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H3	10	H3-10-*	-1	ASWISDFFDY	BBBABEBBAB
M	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	LDKSKRTA	BBAAALBB
P	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	100.0	L1	15	L1-15-*	-1	RASQSVStssySYMH	BBABBABBAABBBBB
P	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	7	SYASNLES	BLLABBBB
P	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-2	11	QHSWGIPRT	BBABEBbBB
P	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
Q	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	76.9	H1	13	H1-13-1	10	ATSGYTFTEYIIH	BBBLBBAAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	40.0	H2	10	H2-10-*	-1	SINPDYDITN	BBBAABABBB
Q	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H3	10	H3-10-*	-1	ASWISDFFDY	BBBABLBBAB
Q	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	LDKSKRTA	BBAAALBB
R	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	100.0	L1	15	L1-15-*	-1	RASQSVStssySYMH	BBABBABBAABBBBB
R	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	7	SYASNLES	BLLABBBB
R	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-2	10	QHSWGIPRT	BBABEBbBB
R	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
S	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	76.9	H1	13	H1-13-1	10	ATSGYTFTEYIIH	BBBLBBAAABBBB
S	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	40.0	H2	10	H2-10-*	-1	SINPDYDITN	BBBAABABBB
S	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H3	10	H3-10-*	-1	ASWISDFFDY	BBBABLBBAB
S	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	LDKSKRTA	BBAAALBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	100.0	L1	15	L1-15-*	-1	RASQSVStssySYMH	BBABBABBAABBBBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	7	SYASNLES	BLLABBBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-2	10	QHSWGIPRT	BBABEBbBB
T	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
U	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	76.9	H1	13	H1-13-1	10	ATSGYTFTEYIIH	BBBLBBAAABBBB
U	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	40.0	H2	10	H2-10-*	-1	SINPDYDITN	BBBAABABBB
U	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H3	10	H3-10-*	-1	ASWISDFFDY	BBBABLBBAB
U	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	LDKSKRTA	BBAAALBB
V	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	100.0	L1	15	L1-15-*	-1	RASQSVStssySYMH	BBABBABBAABBBBB
V	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	7	SYASNLES	BLLABBBB
V	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-2	10	QHSWGIPRT	BBABEBbBB
V	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
W	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	76.9	H1	13	H1-13-1	9	ATSGYTFTEYIIH	BBBLBBAAABBBB
W	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	40.0	H2	10	H2-10-*	-1	SINPDYDITN	BBBAABABBB
W	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H3	10	H3-10-*	-1	ASWISDFFDY	BBBABEBBAB
W	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	7	LDKSKRTA	BBAAALBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	100.0	L1	15	L1-15-*	-1	RASQSVStssySYMH	BBABBABBAABBBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	8	SYASNLES	BLLABBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-2	10	QHSWGIPRT	BBABEBbBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
Z	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	76.9	H1	13	H1-13-1	10	ATSGYTFTEYIIH	BBBLBBAAABBBB
Z	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Mo_IGHV1S113*01	40.0	H2	10	H2-10-*	-1	SINPDYDITN	BBBAABABBB
Z	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H3	10	H3-10-*	-1	ASWISDFFDY	BBBABEBBAB
Z	heavy	Homo.sapiens	Hu_IGHV3-66*01	87.7	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	LDKSKRTA	BBAAALBB

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