PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4Z0B

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-9-3*01	94.5	Mo_IGHV5-9-3*01	92.3	H1	13	H1-13-1	14	AASGFTFSSYAME	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-9-3*01	94.5	Mo_IGHV5-9-3*01	60.0	H2	10	H2-10-2	18	YISTGGGSTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-9-3*01	94.5	Mo_IGHV5-9-3*01	100.0	H3	15	H3-15-*	-1	ARHNYYGgRIYSMDY
H	heavy	Mus.musculus	Mo_IGHV5-9-3*01	94.5	Mo_IGHV5-9-3*01	100.0	H4	8	H4-8-1	13	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-59*01	90.9	Mo_IGKV4-59*01	90.0	L1	10	L1-10-1	20	SASSSVSEMH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-59*01	90.9	Mo_IGKV4-59*01	100.0	L2	8	L2-8-*	-1	ydtsklas
L	kappa	Mus.musculus	Mo_IGKV4-59*01	90.9	Mo_IGKV4-59*01	50.0	L3	9	L3-9-*	-1	QQGSENTET	BBAABBBAB
L	kappa	Mus.musculus	Mo_IGKV4-59*01	90.9	Mo_IGKV4-59*01	83.3	L4	6	L4-6-2	24	GSGTDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022