PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4YWG

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-34*12	83.6	Hu_IGHV4-34*12	84.6	H1	13	H1-13-*	-1	AVYGGSFGRYYWS	BBBLEBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*12	83.6	Hu_IGHV4-34*12	55.6	H2	9	H2-9-1	22	QIDHTGSTT	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*12	83.6	Hu_IGHV4-34*12	100.0	H3	20	H3-20-*	-1	ARAPSGypgvslYQYYGLDV
H	heavy	Homo.sapiens	Hu_IGHV4-34*12	83.6	Hu_IGHV4-34*12	62.5	H4	8	H4-8-1	13	IDSSTNQF	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV4-34*12	83.6	Hu_IGHV4-34*12	84.6	H1	13	H1-13-*	-1	AVYGGSFGRYYWS	BBBLBBABLBBBB
I	heavy	Homo.sapiens	Hu_IGHV4-34*12	83.6	Hu_IGHV4-34*12	55.6	H2	9	H2-9-1	17	QIDHTGSTT	BBBAALBBB
I	heavy	Homo.sapiens	Hu_IGHV4-34*12	83.6	Hu_IGHV4-34*12	100.0	H3	20	H3-20-*	-1	ARAPSGypgvslYQYYGLDV
I	heavy	Homo.sapiens	Hu_IGHV4-34*12	83.6	Hu_IGHV4-34*12	62.5	H4	8	H4-8-1	17	IDSSTNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-15*03	89.9	Hu_IGKV3D-15*03	63.6	L1	11	L1-11-1	11	RASQIINTNLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3D-15*03	89.9	Hu_IGKV3D-15*03	75.0	L2	8	L2-8-1	13	YAASARAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-15*03	89.9	Hu_IGKV3D-15*03	71.4	L3	10	L3-10-cis78-*	-1	QQYKHWpPYT	BBAABBbLBB
L	kappa	Homo.sapiens	Hu_IGKV3D-15*03	89.9	Hu_IGKV3D-15*03	100.0	L4	6	L4-6-1	17	GSGTEF	EBEABB
M	kappa	Homo.sapiens	Hu_IGKV3D-15*03	89.9	Hu_IGKV3D-15*03	63.6	L1	11	L1-11-1	14	RASQIINTNLA	BBABBAEABBB
M	kappa	Homo.sapiens	Hu_IGKV3D-15*03	89.9	Hu_IGKV3D-15*03	75.0	L2	8	L2-8-1	13	YAASARAT	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV3D-15*03	89.9	Hu_IGKV3D-15*03	71.4	L3	10	L3-10-cis78-1	15	QQYKHWpPYT	BBBABBbbBB
M	kappa	Homo.sapiens	Hu_IGKV3D-15*03	89.9	Hu_IGKV3D-15*03	100.0	L4	6	L4-6-1	16	GSGTEF	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022