PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4YK4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	9	RASQSISSYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	7	YAASSLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-*	-1	QQSYSIPLT	BBAABBbLB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	100.0	Hu_IGHV4-59*01	100.0	H1	13	H1-13-4	17	TVSGGSISSYYWS	BBBLBBABLBBBB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	100.0	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	10	YIYYSGSTD	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	100.0	Hu_IGHV4-59*01	100.0	H3	19	H3-19-*	-1	ARRRSDFEtvdfiYHYMDV
C	heavy	Homo.sapiens	Hu_IGHV4-59*01	100.0	Hu_IGHV4-59*01	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	10	RASQSISSYLN	BBABBAEABBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	8	YAASSLQS	BLLABBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-*	-1	QQSYSIPLT	BBAABBbLB
Y	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	100.0	Hu_IGHV4-59*01	100.0	H1	13	H1-13-4	16	TVSGGSISSYYWS	BBBLBBABLBBBB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	100.0	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	10	YIYYSGSTD	BBBAALBBB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	100.0	Hu_IGHV4-59*01	100.0	H3	19	H3-19-*	-1	ARRRSDFEtvdfiYHYMDV
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	100.0	Hu_IGHV4-59*01	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB

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