PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4YJZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	91.8	Hu_IGHV1-69*01	69.2	H1	13	H1-13-1	26	KASRGTFSNHAVS	BBBLEBAAABBBB
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	91.8	Hu_IGHV1-69*01	60.0	H2	10	H2-10-*	-1	GLIPIFSTPH	BBBABLLBBB
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	91.8	Hu_IGHV1-69*01	100.0	H3	21	H3-21-*	-1	AREIPGATSgpdhfffYGMDV
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	91.8	Hu_IGHV1-69*01	75.0	H4	8	H4-8-1	7	ADESTNTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*02	95.6	Hu_IGLV1-47*02	69.2	L1	13	L1-13-*	-1	SGSSSNVGTNAVD	BBBAABEAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*02	95.6	Hu_IGLV1-47*02	87.5	L2	8	L2-8-1	6	YYNNQRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*02	95.6	Hu_IGLV1-47*02	55.6	L3	11	L3-11-*	-1	ATWDNSLNDRV	BBBBBLALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*02	95.6	Hu_IGLV1-47*02	100.0	L4	6	L4-6-2	11	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022