PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4YDK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*02	78.1	Hu_IGHV3-23*02	69.2	H1	13	H1-13-1	11	EASGFTFNNYAMG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*02	78.1	Hu_IGHV3-23*02	50.0	H2	10	H2-10-2	11	VTSAHGGSAY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*02	78.1	Hu_IGHV3-23*02	0.0	H3	22	H3-22-*	-1	VRVTfyhegsgyYYRAGNYFDS
H	heavy	Homo.sapiens	Hu_IGHV3-23*02	78.1	Hu_IGHV3-23*02	37.5	H4	8	H4-8-1	9	RDHFIDTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	73.9	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	4	RASQDIANYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	73.9	Hu_IGKV1-33*01	37.5	L2	8	L2-8-1	6	FGATNLHH	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	73.9	Hu_IGKV1-33*01	28.6	L3	9	L3-9-2	18	QQSFQTVGS	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	73.9	Hu_IGKV1-33*01	66.7	L4	6	L4-6-1	16	GHGTHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022