PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4YDJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	56.2	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	RVSGddlgsFHFGTYFMI
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	56.2	Hu_IGHV1-69*06	40.0	H2	10	H2-10-*	-1	GILPSTKTPT	BBBAABBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	56.2	Hu_IGHV1-69*06	100.0	H3	23	H3-23-*	-1	ARERGRHfepknrdnlEGKFFDL
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	56.2	Hu_IGHV1-69*06	12.5	H4	8	H4-8-*	-1	APGVPPVL	BBEBbBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	82.4	CDRLenMismatch	-1.0	L1	8	L1-8-*	-1	AGRSDRVS	BLBAABBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	82.4	Hu_IGLV2-14*01	50.0	L2	8	L2-8-1	10	FDVYRRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	82.4	Hu_IGLV2-14*01	0.0	L3	6	L3-6-*	-1	TSHPYA
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	82.4	Hu_IGLV2-14*01	66.7	L4	6	L4-6-2	23	HSGDTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	56.2	CDRLenMismatch	-1.0	H1	18	H1-18-*	-1	RVSGddlgsFHFGTYFMI
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	56.2	Hu_IGHV1-69*06	40.0	H2	10	H2-10-*	-1	GILPSTKTPT	BBBAABABBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	56.2	Hu_IGHV1-69*06	100.0	H3	23	H3-23-*	-1	ARERGRHfepknrdnlEGKFFDL
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	56.2	Hu_IGHV1-69*06	12.5	H4	8	H4-8-*	-1	APGVPPVL	BBEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	82.4	CDRLenMismatch	-1.0	L1	8	L1-8-*	-1	AGRSDRVS	BEBABLBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	82.4	Hu_IGLV2-14*01	50.0	L2	8	L2-8-1	8	FDVYRRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	82.4	Hu_IGLV2-14*01	0.0	L3	6	L3-6-*	-1	TSHPYA
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	82.4	Hu_IGLV2-14*01	66.7	L4	6	L4-6-2	29	HSGDTA	BBEABB

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