PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4Y5Y

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	76.9	H1	13	H1-13-*	-1	AVSGFTFSKYWMT
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	90.0	H2	10	H2-10-*	-1	NIKPDGSEKY
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	11	H3-11-*	-1	ARVSRGGSFSD	BBBBBLLBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	15	RDNAKNSV	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	92.9	L1	14	L1-14-*	-1	TGTSSDVGaYNYVS	BBBAAABLABABBB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	75.0	L2	8	L2-8-1	19	YEVARRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L3	11	L3-11-*	-1	SSYAGSNNFAV	BBBAEAABABB
B	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	11	KSGNTA	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	76.9	H1	13	H1-13-*	-1	AVSGFTFSKYWMT
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	90.0	H2	10	H2-10-*	-1	NIKPDGSEKY
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	100.0	H3	11	H3-11-*	-1	ARVSRGGSFSD	BBBBBLLBBAB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	95.9	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	15	RDNAKNSV	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	92.9	L1	14	L1-14-2	12	TGTSSDVGaYNYVS	BBBAAAAAABABBB
E	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	75.0	L2	8	L2-8-1	19	YEVARRPS	BLEABBBB
E	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L3	11	L3-11-*	-1	SSYAGSNNFAV	BBBAEAABABB
E	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022