PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4XZU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	84.6	H1	13	H1-13-*	-1	KASDYTFTDYSLH	BBABABAAABBBB
A	heavy	Mus.musculus	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	80.0	H2	10	H2-10-1	12	WINTETGDPA	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	100.0	H3	9	H3-9-*	-1	AREDDGLAS	BBBBLEBAB
A	heavy	Mus.musculus	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	75.0	H4	8	H4-8-1	9	LETSVRTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	90.0	L1	10	L1-10-1	10	SASSTVSYMY	BBABBBABBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	87.5	L2	8	L2-8-1	11	SDTSNLAS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	75.0	L3	9	L3-9-cis7-1	16	QHWSSYPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	100.0	L4	6	L4-6-1	11	GSGTSY	EBEABB
E	heavy	Mus.musculus	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	84.6	H1	13	H1-13-*	-1	KASDYTFTDYSLH	BBBBBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	80.0	H2	10	H2-10-1	19	WINTETGDPA	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	100.0	H3	9	H3-9-*	-1	AREDDGLAS	BBBBLEBAB
E	heavy	Mus.musculus	Mo_IGHV9-2-1*01	94.5	Mo_IGHV9-2-1*01	75.0	H4	8	H4-8-1	15	LETSVRTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	90.0	L1	10	L1-10-1	8	SASSTVSYMY	BBABBBABBB
F	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	87.5	L2	8	L2-8-1	13	SDTSNLAS	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	75.0	L3	9	L3-9-cis7-1	17	QHWSSYPLT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV4-55*01	97.1	Mo_IGKV4-55*01	100.0	L4	6	L4-6-1	11	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022