PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4XVJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	91.8	Hu_IGHV3-23*04	53.8	H1	13	H1-13-4	18	VASGLTFTNFAVS	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	91.8	Hu_IGHV3-23*04	80.0	H2	10	H2-10-1	10	AISSSDGSTY	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	91.8	Hu_IGHV3-23*04	50.0	H3	20	H3-20-*	-1	ARAvvssdiTYTYWSKYFDY
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	91.8	Hu_IGHV3-23*04	75.0	H4	8	H4-8-*	-1	RDSSMNTL	BBAALABB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	84.6	L1	13	L1-13-1	8	SGGSFNIGNNYVS	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	75.0	L2	8	L2-8-*	-1	YDNDNRPS	BLLABBBA
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	77.8	L3	11	L3-11-1	12	GTWDSSLNVVV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	9	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022