PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4XP6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-9-4*01	94.5	Mo_IGHV5-9-4*01	100.0	H1	13	H1-13-1	12	AASGFTFSSYAMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-9-4*01	94.5	Mo_IGHV5-9-4*01	80.0	H2	10	H2-10-2	20	EISSGGRYIY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-9-4*01	94.5	Mo_IGHV5-9-4*01	100.0	H3	12	H3-12-*	-1	ARGEVRQRGFDY	BBlABAAAEBAB
H	heavy	Mus.musculus	Mo_IGHV5-9-4*01	94.5	Mo_IGHV5-9-4*01	75.0	H4	8	H4-8-1	11	RDNARNIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-57-1*01	98.5	Mo_IGKV4-57-1*01	91.7	L1	12	L1-12-1	10	RASSSVgSSYLH	BBABBBBAAABB
L	kappa	Mus.musculus	Mo_IGKV4-57-1*01	98.5	Mo_IGKV4-57-1*01	100.0	L2	8	L2-8-1	24	YSTSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-57-1*01	98.5	Mo_IGKV4-57-1*01	87.5	L3	9	L3-9-cis7-1	13	QQFSGYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-57-1*01	98.5	Mo_IGKV4-57-1*01	100.0	L4	6	L4-6-1	14	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022