PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4XML

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	87.7	Hu_IGHV3-66*03	61.5	H1	13	H1-13-1	14	AASDFSVSEYYMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	87.7	Hu_IGHV3-66*03	44.4	H2	9	H2-9-1	11	VLYKDGSQF	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	87.7	Hu_IGHV3-66*03	100.0	H3	17	H3-17-*	-1	ARENADYgsdYYFGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-66*03	87.7	Hu_IGHV3-66*03	87.5	H4	8	H4-8-1	8	RDNSKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	94.2	Hu_IGKV2-28*01	75.0	L1	16	L1-16-*	-1	RASQSLlysdgHNYLD	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	94.2	Hu_IGKV2-28*01	87.5	L2	8	L2-8-1	14	YLGSTRAS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	94.2	Hu_IGKV2-28*01	57.1	L3	8	L3-8-*	-1	MQPLQSYT	BBAABbLB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	94.2	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022