PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4XI5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L1	11	L1-11-*	-1	RASQGISSWLA	BBABABAABBB
C	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	AAAAABAB
C	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	85.7	L3	9	L3-9-*	-1	QQANNFPLT	BBAABAABB
C	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	29	GSGTDF	EBLABB
D	heavy	Homo.sapiens	Hu_IGHV3-30*01	90.4	Hu_IGHV3-30*01	76.9	H1	13	H1-13-*	-1	GASGFTFNTYAMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*01	90.4	Hu_IGHV3-30*01	50.0	H2	10	H2-10-*	-1	VVSDGGGNRY	BBBBEBBBBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*01	90.4	Hu_IGHV3-30*01	100.0	H3	14	H3-14-*	-1	ARSRGNHYYYGMDV	BBBABABAAAEBAB
D	heavy	Homo.sapiens	Hu_IGHV3-30*01	90.4	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	25	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022