PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4XAK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBLEBAEABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	90.0	H2	10	H2-10-1	14	GIIPIFGTAS	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H3	18	H3-18-*	-1	ARVGYCSstscNRGAFDI
D	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H4	8	H4-8-1	9	ADKSTSTA	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-17*01	95.7	Hu_IGKV1-17*01	100.0	L1	11	L1-11-1	19	RASQGIRNDLG	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-17*01	95.7	Hu_IGKV1-17*01	100.0	L2	8	L2-8-1	17	YAASSLQS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-17*01	95.7	Hu_IGKV1-17*01	71.4	L3	9	L3-9-cis7-1	15	QQLNSYPLT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-17*01	95.7	Hu_IGKV1-17*01	83.3	L4	6	L4-6-1	15	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BBBLEBAEABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	90.0	H2	10	H2-10-1	10	GIIPIFGTAS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H3	18	H3-18-*	-1	ARVGYCSstscNRGAFDI
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	100.0	Hu_IGHV1-69*06	100.0	H4	8	H4-8-1	15	ADKSTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*01	95.7	Hu_IGKV1-17*01	100.0	L1	11	L1-11-1	5	RASQGIRNDLG	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*01	95.7	Hu_IGKV1-17*01	100.0	L2	8	L2-8-1	8	YAASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*01	95.7	Hu_IGKV1-17*01	71.4	L3	9	L3-9-cis7-1	13	QQLNSYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-17*01	95.7	Hu_IGKV1-17*01	83.3	L4	6	L4-6-1	19	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022