PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4X7T

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	78.6	H1	14	H1-14-*	-1	AVSGYSITSgYSWN	BBBLBBAAABABBB
A	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	66.7	H2	9	H2-9-1	5	SITYDGSTN	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	100.0	H3	14	H3-14-*	-1	ARGSHYFGHWHFAV	BBBBABLLLABBAB
A	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	75.0	H4	8	H4-8-1	9	RDDSKNTF	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	93.3	L1	15	L1-15-1	13	RASQSVDydgdSYMN	BBABBABBLLBBBBB
B	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	9	YAASYLES	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	42.9	L3	9	L3-9-cis7-1	6	QQSHEDPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	78.6	H1	14	H1-14-*	-1	AVSGYSITSgYSWN	BBBLBBAAABABBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	66.7	H2	9	H2-9-1	5	SITYDGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	100.0	H3	14	H3-14-*	-1	ARGSHYFGHWHFAV	BBBBABLLLABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	75.0	H4	8	H4-8-1	9	RDDSKNTF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	93.3	L1	15	L1-15-1	13	RASQSVDydgdSYMN	BBABBABBLLBBBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	8	YAASYLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	42.9	L3	9	L3-9-cis7-1	6	QQSHEDPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022