PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4X7F

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.3	Al_IGHV3S53*01_VHH	61.5	H1	13	H1-13-*	-1	AASESILSFNHMA	BBABBAAABABBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.3	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	10	VITREGSTD	BBBAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.3	Al_IGHV3S53*01_VHH	50.0	H3	7	H3-7-*	-1	NRGISNP	BAEAABB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.3	Al_IGHV3S53*01_VHH	87.5	H4	8	H4-8-*	-1	RDNAKNMV	BBAABBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.3	Al_IGHV3S53*01_VHH	61.5	H1	13	H1-13-*	-1	AASESILSFNHMA	BBABBAAABABBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.3	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	7	VITREGSTD	BBBAALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.3	Al_IGHV3S53*01_VHH	50.0	H3	7	H3-7-*	-1	NRGISNP	BAEAABB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.3	Al_IGHV3S53*01_VHH	87.5	H4	8	H4-8-1	6	RDNAKNMV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022