PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4X7E

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSIYAMG	BBBEBBBABBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	66.7	H2	9	H2-9-1	8	SISSGGGTN	BBBAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	0.0	H3	14	H3-14-*	-1	KREDYSAYAPPSGS	BBBBBBAABBBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	87.5	H4	8	H4-8-1	3	GDNAKNTV	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	92.3	H1	13	H1-13-*	-1	AASGSIFSIYAMG	BBBEBBBABBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	66.7	H2	9	H2-9-1	8	SISSGGGTN	BBBAALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	0.0	H3	14	H3-14-*	-1	KREDYSAYAPPSGS	BBBBBBAABBBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	98.6	Al_IGHV3S53*01_VHH	87.5	H4	8	H4-8-1	3	GDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022