PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4X0K

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Mo_IGHV1-82*01	78.1	CDRLenMismatch	-1.0	H1	15	H1-15-1	13	KASGYSLSTSGMgvN	BBBLBBAABBLBBBB
A	heavy	Homo.sapiens	Mo_IGHV1-82*01	78.1	CDRLenMismatch	-1.0	H2	9	H2-9-1	10	HIYWDDDKR	BBBAALBBB
A	heavy	Homo.sapiens	Mo_IGHV1-82*01	78.1	Mo_IGHV1-82*01	100.0	H3	14	H3-14-*	-1	ARRGGSSHYYAMDY	BBBAEAAALLBBAB
A	heavy	Homo.sapiens	Mo_IGHV1-82*01	78.1	Mo_IGHV1-82*01	75.0	H4	8	H4-8-1	6	VDKSSSTV	BBAAALBB
B	kappa	Homo.sapiens	Mo_IGKV1-117*02	95.7	Mo_IGKV1-117*02	100.0	L1	16	L1-16-1	7	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Mo_IGKV1-117*02	95.7	Mo_IGKV1-117*02	87.5	L2	8	L2-8-1	4	YKVSNRFS	BLLABBBB
B	kappa	Homo.sapiens	Mo_IGKV1-117*02	95.7	Mo_IGKV1-117*02	85.7	L3	9	L3-9-cis7-1	7	FQGSLVPPT	BBAABBbBB
B	kappa	Homo.sapiens	Mo_IGKV1-117*02	95.7	Mo_IGKV1-117*02	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Mo_IGHV1-82*01	78.1	CDRLenMismatch	-1.0	H1	15	H1-15-1	13	KASGYSLSTSGMgvN	BBBLBBAABBLBBBB
H	heavy	Homo.sapiens	Mo_IGHV1-82*01	78.1	CDRLenMismatch	-1.0	H2	9	H2-9-1	9	HIYWDDDKR	BBBAALBBB
H	heavy	Homo.sapiens	Mo_IGHV1-82*01	78.1	Mo_IGHV1-82*01	100.0	H3	14	H3-14-*	-1	ARRGGSSHYYAMDY	BBBAEAAALLBBAB
H	heavy	Homo.sapiens	Mo_IGHV1-82*01	78.1	Mo_IGHV1-82*01	75.0	H4	8	H4-8-1	17	VDKSSSTV	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV1-117*02	95.7	Mo_IGKV1-117*02	100.0	L1	16	L1-16-1	8	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Mo_IGKV1-117*02	95.7	Mo_IGKV1-117*02	87.5	L2	8	L2-8-1	4	YKVSNRFS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV1-117*02	95.7	Mo_IGKV1-117*02	85.7	L3	9	L3-9-cis7-1	8	FQGSLVPPT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV1-117*02	95.7	Mo_IGKV1-117*02	100.0	L4	6	L4-6-2	13	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022