PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4UTA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-64D*06	94.5	Hu_IGHV3-64D*06	84.6	H1	13	H1-13-1	9	SASGFTFSTYSMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-64D*06	94.5	Hu_IGHV3-64D*06	40.0	H2	10	H2-10-2	13	AITGEGDSAF	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-64D*06	94.5	Hu_IGHV3-64D*06	50.0	H3	15	H3-15-*	-1	VGGYSNfYYYYTMDV
H	heavy	Homo.sapiens	Hu_IGHV3-64D*06	94.5	Hu_IGHV3-64D*06	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-64D*06	94.5	Hu_IGHV3-64D*06	84.6	H1	13	H1-13-1	9	SASGFTFSTYSMH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-64D*06	94.5	Hu_IGHV3-64D*06	40.0	H2	10	H2-10-2	13	AITGEGDSAF	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-64D*06	94.5	Hu_IGHV3-64D*06	50.0	H3	15	H3-15-*	-1	VGGYSNfYYYYTMDV
I	heavy	Homo.sapiens	Hu_IGHV3-64D*06	94.5	Hu_IGHV3-64D*06	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	72.7	L1	11	L1-11-1	6	RASQSISTFLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	87.5	L2	8	L2-8-1	5	YDASTRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QQRYNWpPYT	BBABEBBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	83.3	L4	6	L4-6-2	15	RSGTDF	BBEABB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	72.7	L1	11	L1-11-1	6	RASQSISTFLA	BBABBAEABBB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	87.5	L2	8	L2-8-1	5	YDASTRAT	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QQRYNWpPYT	BBABEBBbBB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	94.2	Hu_IGKV3-11*01	83.3	L4	6	L4-6-2	16	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022