PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4UIF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	84.6	H1	13	H1-13-*	-1	KASGGTFNNYAIS
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	90.0	H2	10	H2-10-*	-1	GIIPIFGGAN
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	100.0	H3	14	H3-14-*	-1	ARRPQSIFDWNFDL
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	75.0	H4	8	H4-8-*	-1	ADRSTSTV
H	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	92.3	L1	13	L1-13-*	-1	SGSSSNVGSNYVY
H	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	87.5	L2	8	L2-8-*	-1	YRNNRRPS
H	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	88.9	L3	11	L3-11-*	-1	ATWDDSLSGLV
H	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	L4	6	L4-6-*	-1	KSGTSA
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	84.6	H1	13	H1-13-*	-1	KASGGTFNNYAIS
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	90.0	H2	10	H2-10-*	-1	GIIPIFGGAN
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	100.0	H3	14	H3-14-*	-1	ARRPQSIFDWNFDL
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	75.0	H4	8	H4-8-*	-1	ADRSTSTV
J	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	92.3	L1	13	L1-13-*	-1	SGSSSNVGSNYVY
J	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	87.5	L2	8	L2-8-*	-1	YRNNRRPS
J	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	88.9	L3	11	L3-11-*	-1	ATWDDSLSGLV
J	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	L4	6	L4-6-*	-1	KSGTSA
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	84.6	H1	13	H1-13-*	-1	KASGGTFNNYAIS
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	90.0	H2	10	H2-10-*	-1	GIIPIFGGAN
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	100.0	H3	14	H3-14-*	-1	ARRPQSIFDWNFDL
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	93.2	Hu_IGHV1-69*17	75.0	H4	8	H4-8-*	-1	ADRSTSTV
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	92.3	L1	13	L1-13-*	-1	SGSSSNVGSNYVY
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	87.5	L2	8	L2-8-*	-1	YRNNRRPS
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	88.9	L3	11	L3-11-*	-1	ATWDDSLSGLV
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	100.0	Hu_IGLV1-47*01	100.0	L4	6	L4-6-*	-1	KSGTSA

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022