PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4UBD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	61.5	H1	13	H1-13-1	16	KTSGYSFSTYGVS	BBELBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	70.0	H2	10	H2-10-1	14	WISAYTGITD	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	0.0	H3	19	H3-19-*	-1	ARDKVQGrvevgSGGRHDY
C	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	62.5	H4	8	H4-8-1	10	TDATTATA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	12	RASHRVgSTYIA	BBABBBBAAABB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	14	YGASNRAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	57.1	L3	9	L3-9-cis7-1	14	QQFSVSPWT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	61.5	H1	13	H1-13-1	16	KTSGYSFSTYGVS	BBELBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	70.0	H2	10	H2-10-1	14	WISAYTGITD	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	0.0	H3	19	H3-19-*	-1	ARDKVQGrvevgSGGRHDY
G	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	62.5	H4	8	H4-8-1	11	TDATTATA	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	12	RASHRVgSTYIA	BBABBBBAAABB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	13	YGASNRAT	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	57.1	L3	9	L3-9-cis7-1	14	QQFSVSPWT	BBAABBbBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	24	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	61.5	H1	13	H1-13-1	16	KTSGYSFSTYGVS	BBELBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	70.0	H2	10	H2-10-1	14	WISAYTGITD	BBBAAALBBB
K	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	0.0	H3	19	H3-19-*	-1	ARDKVQGrvevgSGGRHDY
K	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	62.5	H4	8	H4-8-1	11	TDATTATA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	11	RASHRVgSTYIA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	13	YGASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	57.1	L3	9	L3-9-cis7-1	14	QQFSVSPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	24	GSGTDF	EBEABB
O	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	61.5	H1	13	H1-13-1	16	KTSGYSFSTYGVS	BBELBBAAABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	70.0	H2	10	H2-10-1	14	WISAYTGITD	BBBAAALBBB
O	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	0.0	H3	19	H3-19-*	-1	ARDKVQGrvevgSGGRHDY
O	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	62.5	H4	8	H4-8-1	11	TDATTATA	BBAAALBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	11	RASHRVgSTYIA	BBABBBBAAABB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	14	YGASNRAT	BLLABBBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	57.1	L3	9	L3-9-cis7-1	14	QQFSVSPWT	BBAABBbBB
P	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB
S	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	61.5	H1	13	H1-13-1	16	KTSGYSFSTYGVS	BBELBBAAABBBB
S	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	70.0	H2	10	H2-10-1	14	WISAYTGITD	BBBAAALBBB
S	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	0.0	H3	19	H3-19-*	-1	ARDKVQGrvevgSGGRHDY
S	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	62.5	H4	8	H4-8-1	11	TDATTATA	BBAAALBB
T	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	12	RASHRVgSTYIA	BBABBBBAAABB
T	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	14	YGASNRAT	BLLABBBB
T	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	57.1	L3	9	L3-9-cis7-1	14	QQFSVSPWT	BBAABBbBB
T	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB
X	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	12	RASHRVgSTYIA	BBABBBBAAABB
X	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	14	YGASNRAT	BLLABBBB
X	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	57.1	L3	9	L3-9-cis7-1	14	QQFSVSPWT	BBAABBbBB
X	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB
Y	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	61.5	H1	13	H1-13-1	15	KTSGYSFSTYGVS	BBELBBAAABBBB
Y	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	70.0	H2	10	H2-10-1	14	WISAYTGITD	BBBAAALBBB
Y	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	0.0	H3	19	H3-19-*	-1	ARDKVQGrvevgSGGRHDY
Y	heavy	Homo.sapiens	Hu_IGHV1-18*02	84.1	Hu_IGHV1-18*02	62.5	H4	8	H4-8-1	10	TDATTATA	BBAAALBB

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