PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4U6V

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	92.3	H1	13	H1-13-1	9	AASGFTFSSHDMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	88.9	H2	9	H2-9-1	7	GIGTAGDTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	100.0	H3	16	H3-16-*	-1	ARDRYSptGHYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	100.0	H4	8	H4-8-1	10	RENAKNSL	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	92.3	H1	13	H1-13-1	9	AASGFTFSSHDMH	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	88.9	H2	9	H2-9-1	7	GIGTAGDTY	BBBAALBBB
K	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	100.0	H3	16	H3-16-*	-1	ARDRYSptGHYYGMDV
K	heavy	Homo.sapiens	Hu_IGHV3-13*01	98.6	Hu_IGHV3-13*01	100.0	H4	8	H4-8-1	10	RENAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L2	8	L2-8-*	-1	YKASSLES	BLLABBBA
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	42.9	L3	8	L3-8-1	9	KQYADYWT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB
M	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
M	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	11	YKASSLES	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	42.9	L3	8	L3-8-1	9	KQYADYWT	BBAABEBB
M	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	7	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022