PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4U6H

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S26*01	89.0	Mo_IGHV1S26*01	69.2	H1	13	H1-13-1	7	KSSGYTFTRFWMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1S26*01	89.0	Mo_IGHV1S26*01	80.0	H2	10	H2-10-1	6	YINPSTGYTE	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S26*01	89.0	Mo_IGHV1S26*01	100.0	H3	12	H3-12-*	-1	ARSDQTNYLFPY	BBBBAALABBAB
A	heavy	Mus.musculus	Mo_IGHV1S26*01	89.0	Mo_IGHV1S26*01	75.0	H4	8	H4-8-1	9	ADRSSTTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L1	16	L1-16-1	12	RSSQSLvhsngNTYLH	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	15	YKVSNRFS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	85.7	L3	9	L3-9-cis7-1	12	SQSTHDPWT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1S26*01	89.0	Mo_IGHV1S26*01	69.2	H1	13	H1-13-1	9	KSSGYTFTRFWMH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1S26*01	89.0	Mo_IGHV1S26*01	80.0	H2	10	H2-10-1	8	YINPSTGYTE	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1S26*01	89.0	Mo_IGHV1S26*01	100.0	H3	12	H3-12-*	-1	ARSDQTNYLFPY	BBBBAALABBAB
C	heavy	Mus.musculus	Mo_IGHV1S26*01	89.0	Mo_IGHV1S26*01	75.0	H4	8	H4-8-1	11	ADRSSTTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L1	16	L1-16-1	9	RSSQSLvhsngNTYLH	BBABBABBAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	13	YKVSNRFS	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	85.7	L3	9	L3-9-cis7-1	17	SQSTHDPWT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV1-110*01	95.7	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	24	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022