PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4U1G

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV5-4*02	94.5	Mo_IGHV5-4*02	92.3	H1	13	H1-13-1	13	AASGFTFSDFYMY	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-4*02	94.5	Mo_IGHV5-4*02	80.0	H2	10	H2-10-2	16	TISDGDSYIY	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-4*02	94.5	Mo_IGHV5-4*02	100.0	H3	15	H3-15-*	-1	ARDGNGKdGGDAMDY
B	heavy	Mus.musculus	Mo_IGHV5-4*02	94.5	Mo_IGHV5-4*02	87.5	H4	8	H4-8-1	9	RDNAKNIL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV3-7*01	100.0	Mo_IGKV3-7*01	86.7	L1	15	L1-15-*	-1	RASQSVStssyTYFH	BBABBABBAABBBBB
C	kappa	Mus.musculus	Mo_IGKV3-7*01	100.0	Mo_IGKV3-7*01	87.5	L2	8	L2-8-*	-1	RYASNLES	AAAABBBB
C	kappa	Mus.musculus	Mo_IGKV3-7*01	100.0	Mo_IGKV3-7*01	100.0	L3	9	L3-9-2	16	QHSWEIPYT	BBAABABBB
C	kappa	Mus.musculus	Mo_IGKV3-7*01	100.0	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV5-4*02	94.5	Mo_IGHV5-4*02	92.3	H1	13	H1-13-1	12	AASGFTFSDFYMY	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV5-4*02	94.5	Mo_IGHV5-4*02	80.0	H2	10	H2-10-2	17	TISDGDSYIY	BBBAALABBB
E	heavy	Mus.musculus	Mo_IGHV5-4*02	94.5	Mo_IGHV5-4*02	100.0	H3	15	H3-15-*	-1	ARDGNGKdGGDAMDY
E	heavy	Mus.musculus	Mo_IGHV5-4*02	94.5	Mo_IGHV5-4*02	87.5	H4	8	H4-8-1	9	RDNAKNIL	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	100.0	Mo_IGKV3-7*01	86.7	L1	15	L1-15-*	-1	RASQSVStssyTYFH	BBABBABBAABBBBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	100.0	Mo_IGKV3-7*01	87.5	L2	8	L2-8-*	-1	RYASNLES	ABABBBBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	100.0	Mo_IGKV3-7*01	100.0	L3	9	L3-9-2	17	QHSWEIPYT	BBAABABBB
F	kappa	Mus.musculus	Mo_IGKV3-7*01	100.0	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022