PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4TVS

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
a	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	84.6	H1	13	H1-13-1	13	AASGRTLSSYAVG	BBBLBBAAABBBB
a	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	70.0	H2	10	H2-10-2	9	TISRSGGSTH	BBBAALABBB
a	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	100.0	H3	20	H3-20-*	-1	AATftpdgsWYYTRGSSYDY
a	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	5	RDNAKNTV	BBAAALBB
b	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	84.6	H1	13	H1-13-1	15	AASGRTLSSYAVG	BBBEBBAAABBBB
b	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	70.0	H2	10	H2-10-2	9	TISRSGGSTH	BBBAALABBB
b	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	100.0	H3	20	H3-20-*	-1	AATftpdgsWYYTRGSSYDY
b	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	98.6	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022