PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4TPR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	92.3	H1	13	H1-13-1	13	AASGFNIKDYYMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	80.0	H2	10	H2-10-1	8	WIDPENGDIA	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	50.0	H3	14	H3-14-*	-1	NGRGGMITTDFFDY	BBBELAAABBBBBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	95.9	Mo_IGHV14-4*02	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	8	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	8	FQGSHVPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-3	8	GSGTDF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022