PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4RX4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-46*02	66.2	Hu_IGHV1-46*02	53.8	H1	13	H1-13-*	-1	LASEYTFNEFVIH	BBBAAAAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-46*02	66.2	None	-1.0	H2	9	H2-9-1	10	LIKRSGRLM	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-46*02	66.2	Hu_IGHV1-46*02	100.0	H3	18	H3-18-*	-1	ARDGLGEvapaYLYGIDA
A	heavy	Homo.sapiens	Hu_IGHV1-46*02	66.2	Hu_IGHV1-46*02	75.0	H4	8	H4-8-1	11	RDRSTGTV	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*02	84.1	None	0.0	L1	10	L1-10-1	10	RASQGLNFVV	BBABBBABBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*02	84.1	None	25.0	L2	8	L2-8-*	-1	HGPTDRAP	BBABABBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*02	84.1	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	16	QEYSSTPYN	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*02	84.1	Hu_IGKV3D-20*02	83.3	L4	6	L4-6-1	14	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-46*02	66.2	Hu_IGHV1-46*02	53.8	H1	13	H1-13-*	-1	LASEYTFNEFVIH	BBBAAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*02	66.2	None	-1.0	H2	9	H2-9-1	10	LIKRSGRLM	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*02	66.2	Hu_IGHV1-46*02	100.0	H3	18	H3-18-*	-1	ARDGLGEvapaYLYGIDA
H	heavy	Homo.sapiens	Hu_IGHV1-46*02	66.2	Hu_IGHV1-46*02	75.0	H4	8	H4-8-1	11	RDRSTGTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	84.1	None	0.0	L1	10	L1-10-1	10	RASQGLNFVV	BBABBBABBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	84.1	None	25.0	L2	8	L2-8-*	-1	HGPTDRAP	BBbBaBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	84.1	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	16	QEYSSTPYN	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	84.1	Hu_IGKV3D-20*02	83.3	L4	6	L4-6-1	14	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022