PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4RIR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H1	13	H1-13-1	8	KGSGYSFTSYWIG	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H2	10	H2-10-1	13	IIYPGDSDTR	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H3	19	H3-19-*	-1	ARLGGRYYydssgYYYFDY
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	7	ADKSISTA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	9	TRSSGSIASNYVQ	BBABEBAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	11	YEDNQRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	85.7	L3	9	L3-9-*	-1	QSYDSSSWV	BBBALABBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	3	idSSSNSA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H1	13	H1-13-1	10	KGSGYSFTSYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H2	10	H2-10-1	14	IIYPGDSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H3	19	H3-19-*	-1	ARLGGRYYydssgYYYFDY
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	7	ADKSISTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	8	TRSSGSIASNYVQ	BBABEBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	10	YEDNQRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	85.7	L3	9	L3-9-*	-1	QSYDSSSWV	BBBALABBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	100.0	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	4	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022