PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4RGO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5S4*01	83.6	Mo_IGHV5S4*01	84.6	H1	13	H1-13-1	8	ATSGFTFSAYGLS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5S4*01	83.6	CDRLenMismatch	-1.0	H2	9	H2-9-1	5	SISGGGSVY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV5S4*01	83.6	Mo_IGHV5S4*01	50.0	H3	14	H3-14-*	-1	VRDLYGDYVGRYAY	BBBAABBBAABBAB
H	heavy	Mus.musculus	Mo_IGHV5S4*01	83.6	Mo_IGHV5S4*01	50.0	H4	8	H4-8-1	6	RDTAGDIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV5-39*01	98.6	Mo_IGKV5-39*01	90.9	L1	11	L1-11-1	5	RASQSIGDYLH	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV5-39*01	98.6	Mo_IGKV5-39*01	87.5	L2	8	L2-8-1	16	NYASQSIS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV5-39*01	98.6	Mo_IGKV5-39*01	100.0	L3	9	L3-9-cis7-1	14	QNGHSFPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV5-39*01	98.6	Mo_IGKV5-39*01	100.0	L4	6	L4-6-1	11	GSGSDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022