PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4R9Y

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S120*01	96.7	Mo_IGHV1S120*01	76.9	H1	13	H1-13-*	-1	KASGYTFTNYFIY	BBBEAAAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S120*01	96.7	Mo_IGHV1S120*01	70.0	H2	10	H2-10-1	31	EINPRNGDTD	BBBAAALBBL
H	heavy	Mus.musculus	Mo_IGHV1S120*01	96.7	Mo_IGHV1S120*01	0.0	H3	13	H3-13-*	-1	TRSPYGNNYGFTY	BBBABEABLEBAB
H	heavy	Mus.musculus	Mo_IGHV1S120*01	96.7	Mo_IGHV1S120*01	100.0	H4	8	H4-8-1	30	VDKSSSTA	BBAABLBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	91.3	Mo_IGKV6-15*01	100.0	L1	11	L1-11-2	20	KASQNVGTNVA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	91.3	Mo_IGKV6-15*01	100.0	L2	8	L2-8-*	-1	YSASYRYS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	91.3	Mo_IGKV6-15*01	100.0	L3	9	L3-9-cis7-1	23	QQYNSYPLT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	91.3	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
M	kappa	Mus.musculus	Mo_IGKV6-15*01	91.3	Mo_IGKV6-15*01	100.0	L1	11	L1-11-2	19	KASQNVGTNVA	BBABBALLBBB
M	kappa	Mus.musculus	Mo_IGKV6-15*01	91.3	Mo_IGKV6-15*01	100.0	L2	8	L2-8-*	-1	YSASYRYS	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV6-15*01	91.3	Mo_IGKV6-15*01	100.0	L3	9	L3-9-cis7-1	23	QQYNSYPLT	BBBABBbBB
M	kappa	Mus.musculus	Mo_IGKV6-15*01	91.3	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB
N	heavy	Mus.musculus	Mo_IGHV1S120*01	96.7	Mo_IGHV1S120*01	76.9	H1	13	H1-13-*	-1	KASGYTFTNYFIY	BBBEAAAAABBBB
N	heavy	Mus.musculus	Mo_IGHV1S120*01	96.7	Mo_IGHV1S120*01	70.0	H2	10	H2-10-1	29	EINPRNGDTD	BBBAAALBBB
N	heavy	Mus.musculus	Mo_IGHV1S120*01	96.7	Mo_IGHV1S120*01	0.0	H3	13	H3-13-*	-1	TRSPYGNNYGFTY	BBBABEABLEBAB
N	heavy	Mus.musculus	Mo_IGHV1S120*01	96.7	Mo_IGHV1S120*01	100.0	H4	8	H4-8-*	-1	VDKSSSTA	BBAABLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022