PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4R2G

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	LBBBBEBBBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	62.5	L2	8	L2-8-*	-1	YNNQDRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTTA
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	76.9	H1	13	H1-13-*	-1	IVSGGSISNYYWT	BBAAEbAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	19	YISDRETTT	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYYMDV
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	16	RDTSKNQL	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	ABBBABBBBBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	62.5	L2	8	L2-8-1	13	YNNQDRPS	BLEABBBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTTA
J	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	76.9	H1	13	H1-13-*	-1	IVSGGSISNYYWT	BBBBbBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	13	YISDRETTT	BBBAALBBB
J	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYYMDV
J	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	14	RDTSKNQL	BBAAALBB
M	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	ABBBABBBBBB
M	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	62.5	L2	8	L2-8-*	-1	YNNQDRPS	BLEABBBB
M	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
M	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTTA
N	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	76.9	H1	13	H1-13-1	17	IVSGGSISNYYWT	BBBLEBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	18	YISDRETTT	BBBAALBBB
N	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYYMDV
N	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	13	RDTSKNQL	BBAAALBB
P	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	ABBBBEBBBBB
P	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	62.5	L2	8	L2-8-4	12	YNNQDRPS	BEAABBBB
P	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
P	lambda	Homo.sapiens	Hu_IGLV3-21*01	75.8	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTTA
Q	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	76.9	H1	13	H1-13-1	23	IVSGGSISNYYWT	BBBEBBAAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	16	YISDRETTT	BBBAALBBB
Q	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYYMDV
Q	heavy	Homo.sapiens	Hu_IGHV4-59*03	82.2	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	18	RDTSKNQL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022