PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4R0L

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV9-3-1*01	97.3	Mo_IGHV9-3-1*01	92.3	H1	13	H1-13-*	-1	KASGYTFTNYGMT	BBBLBAEAABBBB
A	heavy	Mus.musculus	Mo_IGHV9-3-1*01	97.3	Mo_IGHV9-3-1*01	90.0	H2	10	H2-10-1	19	WINTYTGRPT	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV9-3-1*01	97.3	Mo_IGHV9-3-1*01	50.0	H3	7	H3-7-*	-1	ASLGEDF	BBLLLAB
A	heavy	Mus.musculus	Mo_IGHV9-3-1*01	97.3	Mo_IGHV9-3-1*01	100.0	H4	8	H4-8-1	13	LETSASTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	93.8	L1	16	L1-16-1	24	RSTKSLlhsngNTYLY	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	87.5	L2	8	L2-8-*	-1	YYMSNLAS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	85.7	L3	9	L3-9-cis7-1	16	MQSLEYPYT	BBBABBbBB
B	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	83.3	L4	6	L4-6-*	-1	GSGTDF	BALABB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	97.3	Mo_IGHV9-3-1*01	92.3	H1	13	H1-13-1	16	KASGYTFTNYGMT	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	97.3	Mo_IGHV9-3-1*01	90.0	H2	10	H2-10-1	21	WINTYTGRPT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	97.3	Mo_IGHV9-3-1*01	50.0	H3	7	H3-7-*	-1	ASLGEDF	BBLLLAB
H	heavy	Mus.musculus	Mo_IGHV9-3-1*01	97.3	Mo_IGHV9-3-1*01	100.0	H4	8	H4-8-1	11	LETSASTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	93.8	L1	16	L1-16-1	22	RSTKSLlhsngNTYLY	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	87.5	L2	8	L2-8-*	-1	YYMSNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	85.7	L3	9	L3-9-cis7-1	15	MQSLEYPYT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	83.3	L4	6	L4-6-3	26	GSGTDF	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022